PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe4G062200.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 199aa    MW: 22484.5 Da    PI: 9.9586
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe4G062200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.55e-132072155
                       CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                HLH  1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                       ++ +hn  Er RR+++N+  ++L++llP+ +   + kKls  ++  ++ +YI +Lq
  Aqcoe4G062200.1.p 20 KKLNHNVSERDRRKKLNTLCSTLQSLLPNiD---NTKKLSIPSTICQVLKYIPQLQ 72
                       6789*************************88...8888*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.32E-161785IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.46E-101776No hitNo description
PROSITE profilePS5088814.2081971IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.4E-142086IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.4E-102072IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.1E-82577IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
NNLHSVNHSI SRTSSDPSTK KLNHNVSERD RRKKLNTLCS TLQSLLPNID NTKKLSIPST  60
ICQVLKYIPQ LQNQVARLKQ RKETLSSISK QSDSTHYTRQ SNVLGQSSLP TVSARRIDDS  120
QVVIHICTLK KNKSVFSEVL EIVERDNLHI LNASVITSSE NSLFYTLHVQ QVNGTQRVEC  180
EVLSENILSL FKKEEFFP*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010276688.12e-50PREDICTED: transcription factor ORG2-like
TrEMBLA5C6G08e-50A5C6G0_VITVI; Putative uncharacterized protein
TrEMBLD7TIN88e-50D7TIN8_VITVI; Putative uncharacterized protein
STRINGVIT_08s0007g05300.t012e-49(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.16e-43bHLH family protein